Tutorials for DOCK 6.8

Rizzo Lab DOCK 6 Wiki Tutorials

 

Rigid and Flexible Ligand Docking

NOTE: All the input files for these tutorials can be found in the tutorials/ligand_sampling_demo directory in the DOCK distribution.

Receptor and Ligand Structure Preparation (download files)

Sphere Generation and Selection (download files)

Grid Generation (download files)

Docking (download files)

 

AMBER Score

Overview and Input Preparation
  NOTE: The input files are in tutorials/amber_scoring_demo.

Custom Input Preparation